PhD students in Russia
Nadezhda Bykova
group: Prof. Andrey Mironov
german co-supervisor: Prof. J. Parsch
PhD project: Analysis of signal peptide evolution
Kirill Chernorizov
group: Prof. Vytas Svedas
german co-supervisor: Prof. D. Frishman
PhD project: Search for activity modulators of chaperone Hsp70 and glyceraldehyde-3-phosphate dehydrogenase using molecular modeling.
Stepan Denisov
Group: Prof. Mikhail Gelfand
german co-supervisor: Prof. D. Frishman
PhD project: Evolution of splice sites
Yulia Elkina
group: Prof. Vladimir Muronetz
german co-supervisor: Prof. D. Frishman
PhD project: Glyceraldehyde-3-phosphate dehydrogenase from sperms: isolation, properties, and its role in the sperm motility
(PhD defense in fall 2010)
Gennady Fedonin
group: Prof. Mikhail Gelfand
PhD project: Pattern recognition methods in the analysis of protein functional specificity.
Sofia Garushyant
group: Prof. Mikhail Gelfand
PhD project: Horizontal transfer in the evolution of methanogenis archaeae.
Alexander Goland
group: Prof. Sergei Spirin
PhD project: Phylogeny and reconstruction of ancestral sequences
Anna Kaznadzey
group: Prof. Mikhail Gelfand
PhD project: Evolution of sugar utilisation loci in bacterial genomes.
Ekaterina Khrameeva
group: Prof. Andrey Mironov
co-supervisor: Prof. J. Parsch
PhD project: Spatial relationships in the genome.
Georgiy Kiselev
group: Prof. Vladimir Muronetz
german co-supervisor: Prof. D. Frishman
PhD project: The role of molecular chaperons in the formation of the beta-structured aggregates of amyloid proteins
Yuri Korostelev
group: Prof. Mikhail Gelfand
PhD project: Computational methods in the analysis of protein-DNA interactions and their application.
Mikhail Kuravsky
group: Prof. Vladimir Muronetz
PhD project: Human isoenzymes of glyceraldehyde-3-phosphate dehydrogenase: catalytic properties, evolution, and role in diseases
Semen Leyn
group: Prof. Mikhail Gelfand
german co-supervisor: Prof. S. Kramer
PhD project: Regulatory interactions in selected bacterial taxa
Pavel Mazin
Group: Prof. Andrey Mironov
german co-supervisor: Prof. J. Parsch
PhD project: Analysis of splicing using high troughput data
Anna Nikulova
group: Prof. Andrey Mironov
german co-supervisor: Prof. J. Parsch
PhD project: Comparative methods for prediction transcription regulation in eukaryotic genomes
Dmitry Nilov
group: Prof. Vytas Svedas
german co-supervisor: Prof. R. Zimmer
PhD project: Molecular modeling of enzyme interaction with substrates and inhibitors on the example of formate dehydrogenase and poly(ADP-ribose)-polymerase.
Pavel Semenyuk
group: Prof. Vladimir Muronetz
PhD project: Stabilization of protein aggregates using polyelectrolytes.
Yulia Shchutskaya
group: Prof. Vladimir Muronetz
PhD project: Role of the aggregation and the formation of disulfide bonds in the generation of amyloid structures by intrinsically disordered proteins: prions ans caseins
(PhD defense in fall 2010)
Sergei Stogov
group: Prof. Vladimir Muronetz
german co-supervisor: Prof. D. Frishman
PhD project: Influence of polyelectrolytes on the functional activity and aggregation state of glyceraldehyde-3-phosphate dehydrogenase.
(PhD defense in fall 2010)
Dmitry Suplatov
group: Prof. Vytas Svedas
german co-supervisor: Prof. D. Frishman
PhD project: Bioinformatics analysis of amino acid residues responsible for specificity of alpha-beta hydrolase enzyme superfamiliy and penicillin-binding proteins.
Inna Suvorova
group: Prof. M. Gelfand
german co-supervisor: Prof. S. Kramer
PhD project: Comparative genomics of the FadR family of bacterial transcription factors.
Olga Tsoy
Group: Prof. Mikhail Gelfand
german co-supervisor: Prof. S. Kramer
PhD project: Evolution of regulatory interactions in bacterial genomes.
Dmitry Vinogradov
group: Prof. Mikhail Gelfand
german co-supervisor: Prof. D. Frishman
PhD project: Exon-Intron structure, alternative splicing and translation of rare codons
